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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs12288260 chr11:93653390 A/G SNORA8 chrX:132286782-132286920:+ 0.6 6.6 1.33E-10 Box Plot
BLCA rs12289316 chr11:77689297 G/T INTS4L1 chr7:64601603-64694600:+ 0.47 6.59 1.43E-10 Box Plot
BLCA rs12289587 chr11:77659743 G/A INTS4L1 chr7:64601603-64694600:+ 0.5 7.09 6.58E-12 Box Plot
BLCA rs12289619 chr11:111182524 A/G ACAD8 chr11:134123389-134135749:+ 0.63 6.76 5.22E-11 Box Plot
BLCA rs12289619 chr11:111182524 A/G BUD13 chr11:116618886-116643704:- 0.6 5.97 5.36E-9 Box Plot
BLCA rs12289619 chr11:111182524 A/G CWF19L2 chr11:107197071-107328570:- 0.62 5.96 5.6E-9 Box Plot
BLCA rs12289619 chr11:111182524 A/G NPAT chr11:108027942-108093369:- 0.48 6.02 3.99E-9 Box Plot
BLCA rs12289619 chr11:111182524 A/G RNF214 chr11:117103341-117157161:+ 0.8 7.51 4.07E-13 Box Plot
BLCA rs12289619 chr11:111182524 A/G RNF26 chr11:119205237-119208023:+ 0.56 6 4.68E-9 Box Plot
BLCA rs12289619 chr11:111182524 A/G ZW10 chr11:113603909-113644533:- 0.65 8.03 1.23E-14 Box Plot
BLCA rs12290763 chr11:30338305 A/G C11orf58 chr11:16634679-16778428:+ -0.56 -6.08 2.9E-9 Box Plot
BLCA rs12290763 chr11:30338305 A/G CSTF3 chr11:33098734-33183917:- -0.67 -6.31 7.61E-10 Box Plot
BLCA rs12290763 chr11:30338305 A/G HPS5 chr11:18300215-18343745:- -0.48 -6.21 1.4E-9 Box Plot
BLCA rs12290763 chr11:30338305 A/G MRPL17 chr11:6702013-6704632:- -0.53 -6.19 1.56E-9 Box Plot
BLCA rs12290763 chr11:30338305 A/G PIK3C2A chr11:17099277-17229530:- -0.51 -6.31 7.89E-10 Box Plot